ENCFF276PUU

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 874.00 24.78 4.18 100.0 RBMX-210 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 11.00 0.31 0.05 100.0 RBMX-210 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 26.00 1.32 0.12 100.0 RPL4-214 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 37.25 1.28 0.18 48.38 POLG-DT-202 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 39.24 1.35 0.19 66.51 POLG-DT-202 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 4707.00 21.20 22.52 100.0 ENST00000570843 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 109.00 63.37 0.52 100.0 MIR497HG-207 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 1719600.00 99.76 8228.28 99.9 MIR22HG-212 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 57.00 11.97 0.27 39.58 SNORD53B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 2.00 0.42 0.01 66.67 SNORD53B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 87.00 18.28 0.42 60.42 SNORD53B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 833.00 95.20 3.99 100.0 ENST00000578036 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 62.00 7.78 0.30 100.0 RPL23A-207 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 4570.00 93.40 21.87 100.0 MIR744-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 172.00 80.00 0.82 100.0 MIR378C-201 miRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 1.00 20.00 0.00 25.0 MIR142HG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 1.50 0.03 0.01 74.93 RPL23A-208 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 3484.00 67.94 16.67 84.83 RPL23A-208 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 1020.00 19.89 4.88 83.33 RPL23A-208 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 2.49 0.05 0.01 83.14 RPL23A-208 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 1.00 4.00 0.00 100.0 MIR133A1HG-202 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 15.00 0.37 0.07 33.33 RPL17-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 19.00 0.47 0.09 14.96 RPL17-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 815.00 20.27 3.90 98.91 RPL17-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 188.00 4.68 0.90 97.41 RPL17-211 retained intron mesenchymal stem cell (In vitro differentiated cells)