ENCFF276PUU

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 1096.00 51.24 5.24 100.0 GABRE-209 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_155_235_+ 155–235 32.00 0.55 0.15 100.0 RPL13A-212 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 5.00 0.09 0.02 100.0 RPL13A-212 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_804_886_+ 804–886 4.00 0.07 0.02 100.0 RPL13A-212 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_197_235_+ 197–235 109.00 1.88 0.52 100.0 RPL13A-212 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000488946.1 ENST00000488946.1_1363_1444_+ 1363–1444 1.00 0.02 0.00 100.0 RPL13A-212 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_151_188_+ 151–188 308.00 7.02 1.47 100.0 RPL7A-207 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_151_191_+ 151–191 1450.00 33.06 6.94 100.0 RPL7A-207 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000489392.1 ENST00000489392.1_116_191_+ 116–191 13.00 0.30 0.06 72.22 RPL7A-207 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000494697.5 ENST00000494697.5_306_348_+ 306–348 1185.00 59.13 5.67 99.75 NOP56-217 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000494697.5 ENST00000494697.5_274_348_+ 274–348 7.00 0.35 0.03 100.0 NOP56-217 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_2059_2091_+ 2059–2091 243.00 1.99 1.16 100.0 RABGGTB-213 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_552_+ 471–552 30.00 0.25 0.14 100.0 RABGGTB-213 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_2059_2126_+ 2059–2126 3.00 0.02 0.01 100.0 RABGGTB-213 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_515_+ 471–515 60.00 0.49 0.29 19.17 RABGGTB-213 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_471_517_+ 471–517 253.00 2.07 1.21 80.83 RABGGTB-213 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 3445.00 28.23 16.48 100.0 RABGGTB-213 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000496055.5 ENST00000496055.5_493_553_+ 493–553 70.00 0.57 0.33 100.0 RABGGTB-213 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 2733.00 59.23 13.08 100.0 GNL3-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 113.00 2.45 0.54 100.0 GNL3-211 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 759.00 85.19 3.63 100.0 RPL5-205 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 1.00 0.11 0.00 100.0 RPL5-205 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 434.00 3.69 2.08 100.0 ZBED9-AS1-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 169.00 31.12 0.81 100.0 RPS3A-206 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 1224.00 47.85 5.86 100.0 COX7C-203 protein coding mesenchymal stem cell (In vitro differentiated cells)