ENCFF276PUU

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 16.00 1.47 0.08 100.0 RPS8-206 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 14.00 0.46 0.07 100.0 RPL13-207 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 2258.00 74.33 10.80 100.0 RPL13-207 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_348_405_+ 348–405 30.00 0.06 0.14 15.0 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 9289.00 19.42 44.45 90.19 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 1415.00 2.96 6.77 95.16 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 3427.00 7.17 16.40 48.25 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 211.00 0.44 1.01 89.79 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 225.00 0.47 1.08 17.7 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 2.00 0.00 0.01 100.0 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 7449.00 15.57 35.64 84.38 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 1575.00 3.29 7.54 64.76 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 10664.00 22.30 51.03 99.1 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 2.00 0.00 0.01 100.0 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 2343.00 4.90 11.21 67.25 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 4.00 0.01 0.02 100.0 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 2539.00 5.31 12.15 100.0 EIF4A2-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 23.00 9.27 0.11 100.0 RPS8-207 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 1010.00 30.05 4.83 100.0 RPL7A-206 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 1447.00 43.05 6.92 100.0 RPL7A-206 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 950.00 11.62 4.55 98.96 RPL21-209 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 1370.00 16.75 6.56 100.0 RPL21-209 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 2610.00 31.91 12.49 100.0 RPL21-209 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 376.00 4.60 1.80 100.0 RPL21-209 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 153.00 1.87 0.73 100.0 RPL21-209 retained intron mesenchymal stem cell (In vitro differentiated cells)