ENCFF276PUU

Library Details

Organism: Homo Sapiens
Biosample: mesenchymal stem cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR586TYR
Description: Part of ENCODE experiment ENCSR586TYR.
Author: Joe Ecker, Salk

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 1187.00 16.11 5.68 59.23 MIR194-2HG-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 2532.00 99.41 12.12 100.0 RPS7P15-201 processed pseudogene mesenchymal stem cell (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 7082.00 82.15 33.89 97.43 SNORD62B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 89.00 1.03 0.43 100.0 SNORD62B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 2.00 0.02 0.01 100.0 SNORD62B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 808.00 9.37 3.87 100.0 SNORD62B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 3289.00 97.97 15.74 100.0 MRPL32-203 nonsense mediated decay mesenchymal stem cell (In vitro differentiated cells)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 2078.00 98.30 9.94 100.0 ENST00000436739 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 118.00 20.31 0.56 100.0 TMEM107-204 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 1.00 0.17 0.00 100.0 TMEM107-204 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 28.00 4.82 0.13 84.85 TMEM107-204 protein coding mesenchymal stem cell (In vitro differentiated cells)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 1.00 0.23 0.00 100.0 SNHG16-201 lncRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 137.00 25.18 0.66 97.16 SNORD105B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 8.00 2.86 0.04 100.0 SNORD121B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 12.00 5.36 0.06 100.0 SNORD127-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 157.00 25.91 0.75 100.0 SNORD42B-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 219.00 5.54 1.05 100.0 RNY4P25-201 misc RNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 4.00 2.86 0.02 100.0 SNORD121A-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 2.00 0.27 0.01 28.57 SNORD126-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 9.00 1.20 0.04 81.82 SNORD126-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 6.00 2.32 0.03 100.0 SNORD124-201 snoRNA mesenchymal stem cell (In vitro differentiated cells)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 63277.00 98.23 302.78 100.0 SMC1A-204 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 28.00 0.45 0.13 100.0 RABGGTB-208 protein coding CDS not defined mesenchymal stem cell (In vitro differentiated cells)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 113.00 7.34 0.54 100.0 DDX39B-219 retained intron mesenchymal stem cell (In vitro differentiated cells)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 882.00 57.31 4.22 100.0 DDX39B-219 retained intron mesenchymal stem cell (In vitro differentiated cells)