ENCFF274FTM

Library Details

Organism: Homo Sapiens
Biosample: prostate gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR332RHR
Description: Part of ENCODE experiment ENCSR332RHR. The libraries contained in this Experiment come from tissue sub-sections of a 54 year old male's prostate tissue section obtained from GTEx. They are stranded PE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000663945.1 ENST00000663945.1_2_92_+ 2–92 20748.00 79.65 81.70 96.7 SNHG14-288 lncRNA prostate gland (Tissue)
ENST00000665397.1 ENST00000665397.1_2_81_+ 2–81 5.00 3.29 0.02 100.0 SNHG14-295 lncRNA prostate gland (Tissue)
ENST00000665787.1 ENST00000665787.1_2059_2127_+ 2059–2127 86.00 60.99 0.34 100.0 MEG8-240 lncRNA prostate gland (Tissue)
ENST00000666022.1 ENST00000666022.1_1_88_+ 1–88 26.00 0.46 0.10 100.0 SNHG14-303 lncRNA prostate gland (Tissue)
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 28.00 10.14 0.11 100.0 SNHG14-306 lncRNA prostate gland (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 2.00 0.72 0.01 100.0 SNHG14-306 lncRNA prostate gland (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 129.00 46.74 0.51 99.23 SNHG14-306 lncRNA prostate gland (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 168.00 9.74 0.66 100.0 ENST00000666735 lncRNA prostate gland (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 11.00 0.64 0.04 100.0 ENST00000666735 lncRNA prostate gland (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 969.00 76.36 3.82 100.0 MEG8-242 lncRNA prostate gland (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 667.73 14.11 2.63 37.24 SNHG14-312 lncRNA prostate gland (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 1045.23 22.09 4.12 58.3 SNHG14-312 lncRNA prostate gland (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 245.00 0.95 0.96 100.0 MEG8-244 lncRNA prostate gland (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 234.00 0.91 0.92 100.0 MEG8-244 lncRNA prostate gland (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 24792.00 96.01 97.62 99.68 MEG8-244 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 2742.00 0.37 10.80 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 11999.00 1.61 47.25 98.68 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 1479.02 0.20 5.82 64.14 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 2817.00 0.38 11.09 72.12 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 278487.00 37.37 1096.60 99.72 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 3287.00 0.44 12.94 82.59 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 63989.00 8.59 251.97 98.86 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 20716.00 2.78 81.57 100.0 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 65155.00 8.74 256.56 99.86 SNHG1-248 lncRNA prostate gland (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 239.00 0.03 0.94 100.0 SNHG1-248 lncRNA prostate gland (Tissue)