ENCFF000JIX

Library Details

Organism: Homo Sapiens
Biosample: hair follicle dermal papilla cell (Primary cell)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000CVC
Description: Part of ENCODE experiment ENCSR000CVC. The libraries contained in this experiment come from hair follicle dermal papilla primary whole cells, HFDPC isolated from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000654356.2 ENST00000654356.2_1362_1446_+ 1362–1446 52507.00 16.59 5565.07 98.42 SNHG29-232 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000654356.2 ENST00000654356.2_1361_1440_+ 1361–1440 243089.00 76.81 25764.30 95.56 SNHG29-232 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000654356.2 ENST00000654356.2_1361_1451_+ 1361–1451 781.00 0.25 82.78 100.0 SNHG29-232 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000654356.2 ENST00000654356.2_463_540_+ 463–540 1210.00 0.38 128.24 100.0 SNHG29-232 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 1812.00 21.17 192.05 100.0 SNHG1-248 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000668048.2 ENST00000668048.2_517_601_+ 517–601 1451.00 16.95 153.79 100.0 SNHG1-248 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 3070.00 35.87 325.38 100.0 SNHG1-248 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000668505.1 ENST00000668505.1_982_1066_+ 982–1066 444.00 1.77 47.06 100.0 SNHG5-273 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000668505.1 ENST00000668505.1_1272_1356_+ 1272–1356 8118.00 32.29 860.40 79.29 SNHG5-273 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 11120.00 44.23 1178.58 87.77 SNHG5-273 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000670697.1 ENST00000670697.1_226_313_+ 226–313 451.00 85.90 47.80 100.0 SNHG14-336 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000677786.1 ENST00000677786.1_3513_3605_+ 3513–3605 563.00 69.94 59.67 100.0 NCL-216 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 9099.91 52.51 964.47 71.45 SNHG19-202 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 3812.02 22.00 404.03 33.32 SNHG19-202 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000693179.2 ENST00000693179.2_532_619_+ 532–619 296.00 35.88 31.37 100.0 SNHG8-214 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000722183.1 ENST00000722183.1_108_192_+ 108–192 5552.00 89.53 588.44 100.0 ENST00000722183 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000747512.1 ENST00000747512.1_63_156_+ 63–156 4775.00 87.50 506.09 100.0 ENST00000747512 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 40.00 0.29 4.24 100.0 ENST00000772672 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 12370.00 89.88 1311.06 100.0 ENST00000772672 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000788343.1 ENST00000788343.1_17_107_+ 17–107 18.00 2.72 1.91 100.0 ENST00000788343 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000823279.1 ENST00000823279.1_86_169_+ 86–169 1.00 0.02 0.11 100.0 ENST00000823279 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000823279.1 ENST00000823279.1_78_169_+ 78–169 118.00 2.47 12.51 9.71 ENST00000823279 lncRNA hair follicle dermal papilla cell (Primary cell)