ENCFF000JIX

Library Details

Organism: Homo Sapiens
Biosample: hair follicle dermal papilla cell (Primary cell)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000CVC
Description: Part of ENCODE experiment ENCSR000CVC. The libraries contained in this experiment come from hair follicle dermal papilla primary whole cells, HFDPC isolated from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 90.00 10.60 9.54 78.26 WDR74-204 protein coding hair follicle dermal papilla cell (Primary cell)
ENST00000527983.5 ENST00000527983.5_1314_1406_+ 1314–1406 984.00 54.36 104.29 68.1 HSPA8-211 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000531908.5 ENST00000531908.5_147_241_+ 147–241 2387.00 76.58 252.99 100.0 RPS13-208 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 3195.00 77.96 338.63 100.0 HSPA8-215 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000567229.5 ENST00000567229.5_479_567_+ 479–567 1139.00 63.45 120.72 100.0 RPL4-214 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000570843.1 ENST00000570843.1_1_85_+ 1–85 6342.00 34.86 672.17 100.0 ENST00000570843 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000570843.1 ENST00000570843.1_1_80_+ 1–80 7232.00 39.75 766.50 100.0 ENST00000570843 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 6.05 0.09 0.64 86.48 C19orf48P-203 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 2472.00 37.60 262.00 100.0 C19orf48P-203 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 222.00 24.58 23.53 100.0 RPS11-206 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 16.00 1.15 1.70 100.0 ENST00000602478 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000612233.1 ENST00000612233.1_681_767_+ 681–767 783.00 46.80 82.99 100.0 NOP56-219 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 5.00 0.04 0.53 100.0 U2.3-201 snRNA hair follicle dermal papilla cell (Primary cell)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 93.62 0.70 9.92 34.55 U2.3-201 snRNA hair follicle dermal papilla cell (Primary cell)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 5444.00 40.76 576.99 100.0 U2.3-201 snRNA hair follicle dermal papilla cell (Primary cell)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 12.00 0.09 1.27 92.31 U2.3-201 snRNA hair follicle dermal papilla cell (Primary cell)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 146.59 1.10 15.54 54.09 U2.3-201 snRNA hair follicle dermal papilla cell (Primary cell)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 0.87 0.01 0.09 86.92 U2.3-201 snRNA hair follicle dermal papilla cell (Primary cell)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 7.76 0.06 0.82 77.63 U2.3-201 snRNA hair follicle dermal papilla cell (Primary cell)
ENST00000650796.1 ENST00000650796.1_1641_1732_+ 1641–1732 219.00 0.10 23.21 100.0 GAS5-230 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000650796.1 ENST00000650796.1_358_438_+ 358–438 138027.00 62.54 14629.08 95.32 GAS5-230 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000650796.1 ENST00000650796.1_2165_2249_+ 2165–2249 1026.00 0.46 108.74 100.0 GAS5-230 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 29223.00 13.24 3097.26 75.31 GAS5-230 retained intron hair follicle dermal papilla cell (Primary cell)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 1.00 0.05 0.11 100.0 ENST00000651540 lncRNA hair follicle dermal papilla cell (Primary cell)
ENST00000651540.1 ENST00000651540.1_1_88_+ 1–88 1203.00 63.35 127.50 100.0 ENST00000651540 lncRNA hair follicle dermal papilla cell (Primary cell)