ENCFF000IZM

Library Details

Organism: Homo Sapiens
Biosample: hematopoietic multipotent progenitor cell (In vitro differentiated cells)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000CSR
Description: Part of ENCODE experiment ENCSR000CSR. The libraries contained in this experiment come from whole cell extracts from independent isolates of, mobilized CD34+ precursor blood cells. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size that was pre-treated with TAP prior to cloning.
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000521127.2 ENST00000521127.2_328_412_+ 328–412 2865.00 8.39 293.54 100.0 SNHG6-204 retained intron hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000521127.2 ENST00000521127.2_328_407_+ 328–407 27217.00 79.70 2788.54 100.0 SNHG6-204 retained intron hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000525239.5 ENST00000525239.5_93_187_+ 93–187 5.00 0.47 0.51 83.33 WDR74-204 protein coding hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000527983.5 ENST00000527983.5_1314_1406_+ 1314–1406 2125.00 55.91 217.72 67.46 HSPA8-211 retained intron hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000531908.5 ENST00000531908.5_147_241_+ 147–241 2305.00 83.97 236.16 100.0 RPS13-208 retained intron hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000532091.1 ENST00000532091.1_1128_1221_+ 1128–1221 1059.00 86.10 108.50 100.0 HSPA8-215 retained intron hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000532091.1 ENST00000532091.1_1133_1221_+ 1133–1221 1.00 0.08 0.10 100.0 HSPA8-215 retained intron hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000567229.5 ENST00000567229.5_479_567_+ 479–567 8014.00 80.06 821.08 100.0 RPL4-214 retained intron hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000570843.1 ENST00000570843.1_1_85_+ 1–85 54.00 38.30 5.53 100.0 ENST00000570843 lncRNA hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000570843.1 ENST00000570843.1_1_80_+ 1–80 51.00 36.17 5.23 100.0 ENST00000570843 lncRNA hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 7.00 4.02 0.72 100.0 SNORD3C-201 snoRNA hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 1.00 3.03 0.10 100.0 RPL23A-208 retained intron hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 1.90 0.15 0.19 63.44 C19orf48P-203 retained intron hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 815.00 66.37 83.50 100.0 C19orf48P-203 retained intron hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 71.00 11.40 7.27 100.0 RPS11-206 retained intron hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000612233.1 ENST00000612233.1_681_767_+ 681–767 685.00 46.57 70.18 100.0 NOP56-219 retained intron hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 18.14 0.87 1.86 45.36 U2.3-201 snRNA hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 4.00 0.19 0.41 50.0 U2.3-201 snRNA hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 110.00 5.27 11.27 100.0 U2.3-201 snRNA hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 35.00 1.68 3.59 59.32 U2.3-201 snRNA hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 25.63 1.23 2.63 64.08 U2.3-201 snRNA hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 59.11 2.83 6.06 69.54 U2.3-201 snRNA hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 20.18 0.97 2.07 32.55 U2.3-201 snRNA hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000640631.2 ENST00000640631.2_4119_4213_+ 4119–4213 21.00 1.60 2.15 100.0 SNHG14-224 lncRNA hematopoietic multipotent progenitor cell (In vitro differentiated cells)
ENST00000650796.1 ENST00000650796.1_1641_1732_+ 1641–1732 1722.00 0.83 176.43 100.0 GAS5-230 retained intron hematopoietic multipotent progenitor cell (In vitro differentiated cells)